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ERX4788712: NextSeq 550 paired end sequencing
1 ILLUMINA (NextSeq 550) run: 12.3M spots, 2.6G bases, 1.2Gb downloads

Design: human sweat EV associated DNA E
Submitted by: University of Oulu
Study: Characterization of nucleic acids from extracellular vesicle-enriched human sweat
show Abstracthide Abstract
Volunteers from Oulu University and Oulu area (Northern Finland) were asked to bike for 30-40 minutes wearing a plastic coat and gloves for sweat collection. Sweat was filtered on 0,8 micron filter, then EV enrichment was done using ultracentrifugation for DNA extraction. RNA extraction was done on concentrated samples using ExoRNeasy (Qiagen). Both DNA and RNA were used to make NGS libraries for sequencing. Bioinformatics analysis was performed to identify origin of reads (Human, metagenome) and types of sequences represented.
Sample: DNA-seq
SAMEA7281931 • ERS5042530 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: library 23
Instrument: NextSeq 550
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: PAIRED
Construction protocol: Nextera small genome tagmentation
Runs: 1 run, 12.3M spots, 2.6G bases, 1.2Gb
Run# of Spots# of BasesSizePublished
ERR496978912,254,3292.6G1.2Gb2021-05-12

ID:
14428011

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